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310-Helix stabilization and screw sense control via stereochemically configured 4-atom hydrocarbon staples

Authors
Tran, Duc V. H.Nguyen, Ha T. N.Ahn, Hee-ChulKim, Young-Woo
Issue Date
Nov-2024
Publisher
Elsevier Ltd
Keywords
3 10-Helix; Hydrocarbon staples; Peptide conformation; Screw sense control; Proteinogenic peptides
Citation
Bioorganic & Medicinal Chemistry, v.114, pp 1 - 8
Pages
8
Indexed
SCIE
SCOPUS
Journal Title
Bioorganic & Medicinal Chemistry
Volume
114
Start Page
1
End Page
8
URI
https://scholarworks.dongguk.edu/handle/sw.dongguk/56149
DOI
10.1016/j.bmc.2024.117963
ISSN
0968-0896
1464-3391
Abstract
The 310-helix is a crucial secondary structure in proteins, playing an essential role in various protein-protein interactions, yet stabilizing it in biologically relevant peptides remains challenging. In this study, we investigated the potential of 4-atom hydrocarbon staples to stabilize 310-helices in peptides. Using ring-closing metathesis, we demonstrated that the staple's configuration is critical for both the stabilization and screw sense control of 310helices. Circular dichroism spectroscopy revealed that the Ri,i & thorn;3S(4) staple-a 4-atom cross-link with (R)configuration at the i position, (S)-configuration at the i + 3 position, and flanked by methyl groups-strongly induces right-handed 310-helices, especially in sequences with proteinogenic L-amino acids. Furthermore, multiple staples effectively stabilized longer peptides, underscoring the versatility of this approach for applications in peptide therapeutics and biomolecular engineering.
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