Adaptive laboratory evolution of Escherichia coli W enhances gamma-aminobutyric acid production using glycerol as the carbon source
  • Kim, Kangsan
  • Hou, Chen Yuan
  • Choe, Donghui
  • Kang, Minjeong
  • Cho, Suhyung
  • ... Kang, Taek Jin
  • 외 4명
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초록

The microbial conversion of glycerol into value-added commodity products has emerged as an attractive means to meet the demands of biosustainability. However, glycerol is a non-preferential carbon source for productive fermentation because of its low energy density. We employed evolutionary and metabolic engineering in tandem to construct an Escherichia coli strain with improved GABA production using glycerol as the feedstock carbon. Adaptive evolution of E. coli W under glycerol-limited conditions for 1300 generations harnessed an adapted strain with a metabolic system optimized for glycerol utilization. Mutation profiling, enzyme kinetic assays, and transcriptome analysis of the adapted strain allowed us to decipher the basis of glycerol adaptation at the mo-lecular level. Importantly, increased substrate influx mediated by the mutant glpK and modulation of intracel-lular cAMP levels were the key drivers of improved fitness in the glycerol-limited condition. Leveraging the enhanced capability of glycerol utilization in the strain, we constructed a GABA-producing E. coli W-derivative with superior GABA production compared to the wild-type. Furthermore, rationally designed inactivation of the non-essential metabolic genes, including ackA, mgsA, and gabT, in the glycerol-adapted strain improved the final GABA titer and specific productivity by 3.9-and 4.3-fold, respectively, compared with the wild-type.

키워드

Escherichia coli WGlycerolAdaptive laboratory evolutionGamma-aminobutyric acidMetabolic engineeringGLUTAMATE-DECARBOXYLASEPHOSPHOTRANSFERASE SYSTEMCONFORMATIONAL-CHANGESCATABOLITE REPRESSIONCRYSTAL-STRUCTUREKINASEGROWTHGABAGLUCOSEENZYME
제목
Adaptive laboratory evolution of Escherichia coli W enhances gamma-aminobutyric acid production using glycerol as the carbon source
저자
Kim, KangsanHou, Chen YuanChoe, DonghuiKang, MinjeongCho, SuhyungSung, Bong HyunLee, Dae-HeeLee, Seung-GooKang, Taek JinCho, Byung-Kwan
DOI
10.1016/j.ymben.2021.11.004
발행일
2022-01
유형
Article
저널명
Metabolic Engineering
69
페이지
59 ~ 72